INSTRUCTOR: Dr. Bruce P. Smith
| Center for Natural Sciences Office 166 Lab 171 (607) 274-3971 smithb@ithaca.edu Office Hours: Tues. 1:00 pm - 3:00 pm, or by
appointment |
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Limnoporus dissortis water strider
parasitized
by Neolimnochares johnston |
|
Text:
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Bush, A.O., Fernández, J.C., Esch, G.W., and Seed, J.R. 2001. [T] Parasitism: the diversity and ecology of animal parasites. 1st Edition. Cambridge Univ. Press. |
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Recommended CD:
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Sullivan, J.T. 2006.
A Color Atlas of Parasitology. 7th
Edition. (Includes CD version 3.0). |
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Required reading:
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Desowitz, R.S. 1987 (paperback edit.). [D] New Guinea Tapeworms and Jewish Grandmothers - Tales of Parasites and People. |
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readings & assignments |
Links |
The field of Parasitology cuts across the widely accepted
classification
of Biology into cellular and molecular, within organism, and among
organisms.
This course covers the general biological principles of host/parasite
interactions
from the cellular level (e.g. immunology) through to the ecological
(i.e.
population and community) level. While intended as a general survey of
parasitism through the animal kingdom, special attention will be given
to parasites important in human and veterinary medicine. Classical
aspects
of Parasitology will be covered during this course, namely systematics,
morphology, and life-cycles, but non-traditional topics would include
coevolution
of hosts and their parasites, the use of parasites and parasitoids as
biological
control agents of pest species, and the influence of parasites on hosts
in regards to population biology and community structure.
Goals and Assessment:
The mission statement of our
Department
makes specific reference to providing
fundamental knowledge in biology spanning from molecular biology to
ecology,
and also, to foster the ability to draw
connections between different areas of
biology and between biology and the liberal arts.
Both this course and the field of
Parasitology cuts across various levels of biological organization,
promoting integration
and synthesis across various subdisciplines, through a focus on
a
single biological relationship - the one between hosts and parasites. Many human parasites and vectored
diseases
continue as major sources of illness, disfigurement, and death on a
worldwide level,
but primarily centered in Third World and underdeveloped nations -
largely
because of economics, politics, and social conditions.
Hence, Parasitology has obvious links
to the Humanities, including Economics, Politics,
Anthropology, and
Sociology, and requires a global perspective.
Historically, parasitic and vectored diseases regularly had
profound
effects on the outcome of wars, and various plagues have had dramatic
impact on
human
societies.
Specific Departmental Goals and Assessment:
1. Demonstrate an
understanding of the
fundamental concepts and principles in biology (organismal biology,
population
and evolutionary biology, ecology). [Assessed
by selected questions on the three term tests and final exam]
6. Effectively
communicate scientific works in
both oral and written form. [Assessed by
the Internet Project, Oral Presentation]
GRADING
SCHEME
| Undergraduate (Biol-40500) |
Graduate (Biol-50500) |
||
| |
Lecture Test 1 | 13% | 11% |
| Lecture Test 2 | 13% |
11% | |
| Lecture Test 3 |
13% |
11% | |
| Lab Test 1 | 13% | 12% | |
| Lab Test 2 | 8% | 7% | |
| Final Exam | 20% | 20% | |
| Internet
Project |
13% | 12% | |
| Oral Presentation | 7% |
6% | |
| Teaching
Assignment |
n/a | 10 |
Grade
scale: Letter grades correspond to the following
percentages:
| A = 93.3 – 100% | A- = 90 – 93.2% | ||
|
|
B+ = 86.6 – 89.5% | B = 83.3 – 86.5% | B- = 80 – 83.2% |
| C+ = 76.6 – 79.5% | C = 73.3 – 76.5% | C- = 70 – 73.2% | |
| D+ = 66.6 – 69.5% | D = 63.3 – 66.5% | D- = 60 – 63.2% | |
| F = below 60% |
LECTURE
Lectures are traditional in format,
with a strong emphasis on audiovisual presentation.
The main goal is to establish fundamental
knowledge in the field, and to develop the ‘big picture’, integrating
across subdisciplines of biology and forming connections with other
fields
within the liberal arts.
Assigned readings from Desowitz (1987) are intended to help
students
extend their view beyond the science.
Tests and the final exam are in traditional format and will be
based on
lectures and assigned readings. The
three term tests are not cumulative, while the final exam includes all
material
in the course. Questions include short
answer (typically 8 at 3 points each), fill in the blank (typically 7
at 1
point per blank), and an essay question designed to be answered in 1-2
pages
(typically 1 essay at 8 points). I give
a choice of questions on each section of all lecture tests and the
final exam.
LABORATORY
In the laboratory, the focus is on developing
diagnostic skills. This includes
learning
technique (e.g., proper use of stereoscopic [“dissecting”] and
compound
[bright-field and phase contrast] microscopes, critical
observation
skills
for finding organisms on diagnostic slides and in infected hosts), as well as fundamental
knowledge in
Parasitology (how to recognize and identify various stages of parasitic
organisms, important internal and external anatomy of parasitic
organisms). Inherent to these labs is to
learn basic histology of animal tissues, including both healthy and
infected
material, and to be able to visualize orientation of structures and
parasites
in the 3-dimensional host based upon 2-dimensional microscopic sections. Laboratory tests are in two parts: 1) a
traditional section testing fundamental
knowledge; 2) a problem-solving
application section, in which students need to find and identify
unknown
parasites and pathologies on slides of biological samples.
I will frequently provide background
information from the host’s case history in questions from the latter
section,
to assist students in forming a diagnosis. The application section of
laboratory tests is open book, in which you are allowed to use the
textbook and
hand-outs from your laboratories. The
Color Atlas of Parasitology and various image libraries on the internet
should
be very useful for practicing your diagnostic skills and preparing for
the
laboratory tests. Any information
presented in the laboratory handouts, or presented in demonstrations,
will be
testable material.
COMMUNICATION
SKILLS
(Written, Oral, Electronic)
The written
and oral assignments
are
intended to be independent, self-directed
scientific inquiry. Students must locate
sources of information, both in the traditional
scientific
literature (journals,
books) as well as electronic media -
webpages maintained by the World Health
Organization [WHO], Center for Disease Control [CDC], various
organizations
and governmental agencies, academic
institutions, and faculty. Students
evaluate information, interpreting relevance and reliability, hence practicing
critical thinking skills.
1)
Written
Project
This project involves writing
skills, as a student must summarize and organize information
into a
cohesive synthesis. The written project will be a status report on an
important
parasite or parasite / micropredator-vectored disease, based primarily
on electronic
media (i.e., web-based
resources). Students can choose their
topic from either human or veterinary medicine.
The project will include an expanded literature cited section in
which
you will reference the websites on which you based your report,
including a
brief description of each website. The
first regular laboratory period is scheduled as an introduction to the
internet
and searching for parasitological information, to get you started.
DEADLINE FOR HAND-IN: Oct. 4th , 1:00 p.m. - NO EXTENSIONS!
2)
Oral
Presentation
This assignment emphasizes
organization and clarity, and practice in oral
communication. Each student will
summarize a recent primary
research article, through preparing and delivering a powerpoint presentation. You can choose a paper that interests you,
and I will check whether it is suitable (i.e., not a review article,
and
neither too simple nor too complex), from current research articles
found in
relevant scientific journals (e.g., Parasitology,
Journal of Parasitology, International
Journal for Parasitology,
Medical Entomology, or the Parasitology Section of Canadian
Journal
of Zoology, etc.). The presentation is to be 12-15
min. in length, and will be presented during the Nov. 8th
laboratory period.
NOTE:
DEADLINE FOR APPROVAL OF PAPER: NOV.
1st, 4:00 p.m.
GRADUATE
STUDIES
(MA-Teaching – Biol-50500)
For MAT
students there is an additional assignment, distinguishing it from the
undergraduate course. MAT students will
research a topic that we provide, produce and deliver a powerpoint
presentation, teaching this topic to the class.
This presentation should be approximately 30 min. in length.
POLICY:
1.
Attendance:
The Undergraduate Announcements
state the general policy that students are expected to attend classes
and that
they are responsible for all material even when absent.
Conspicuous unexplained absence (i.e., more
than 10% of the classes) may result in lower
grade, or dismissal from class.
Acceptable
reasons for absence include 1) student illness, requiring the student
to be
bed-ridden; 2) death or serious illness in the immediate family; 3)
appearance
in court; 4) religious holidays. Note
that you MUST have written
documentation for your reason for absence
(e.g., note from doctor, religious leader, etc.)
2.
Readings:
You are expected to read the
assigned readings BEFORE coming to
class, as a background to that day's
lecture. If you have any questions
regarding material in the reading, please ask during class.
3.
Questions:
Please feel free to ask questions
in
class. Chances are that if there is
something that you don't understand, then others in the class are also
confused
- don’t hesitate to ask your question.
4. Accommodation for Students with Disabilities:
5.
Personal
Conduct:
"A student's behavior must not
interfere with the activities of the College or with other student's
pursuit of
educational objectives" (see General Information, Undergraduate
Announcements). Talking during lecture
(except for questions or participating in class discussions) is
disruptive and
is disrespectful to other students and the instructor.
Cell phones, pagers, etc. must
be kept turned off during classes.
Disruptions may result in the student being asked to leave the
class and
the student will be considered absent without excuse.
If asked to leave class on more than one occasion,
the student will be withdrawn from the course.
7.
Course
Evaluations:
Tues./Thurs.
9:25 -
10:40 am, CNS 118
|
Date |
Topic |
Readings T(pgs), D(chapters) |
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Aug. 25 |
Introduction [lab period
- first Wed. is on Monday schedule] |
T(1-9) |
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Aug. 26 |
The Parasite's Environment; start Physiology
& Biochemistry |
D(1, 2) |
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Aug. 31 |
Physiology and Biochemistry; start Immunology |
T(27-35) |
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Sept. 2 |
Immunology; start Parasitic Protozoa |
T(13-27, 42-49) D(10) |
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Sept. 7 |
Parasitic Protozoa: flagellates |
T(49-58) |
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Sept. 9 |
Parasitic Protozoa: amoebae, apicomplexans |
T(58-69), D(6, 13) |
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Sept. 14 |
Parasitic Protozoa: apicomplexans, ciliates,
myxozoans |
T(69-100, 288-292), D(4, 5) |
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Sept. 16 |
Parasitic Flatworms: turbellarians, monogeneans,
aspidobothrians |
T(103-105, 128-134) D(11) |
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Sept. 21 |
Parasitic Flatworms: digeneans |
T(105-117) |
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Sept.23 |
TEST #1 |
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Sept.28 |
Parasitic Flatworms: digeneans; start Tapeworms |
T(117-128, 134-139) |
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Sept.30 |
Tapeworms |
T (139-153), D(8) |
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Oct. 5 |
Parasitic Nematodes |
T(160-173) |
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Oct. 7 |
Parasitic Nematodes |
T(173-184), D(3) |
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Oct. 12 |
Parasitic Nematodes |
T(184-192), D(12) |
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Oct. 14 |
FALL BREAK
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Oct. 19 |
Nematomorpha, Spiny-Headed Worms, Tongueworms |
T(197-223, 296-298) |
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Oct. 21 |
Parasitic Crustacea; Micropredators and Vectors |
T(225-242, 257-263), D(7) |
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Oct. 26 |
Micropredators and Vectors |
T(268-270) |
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Oct. 28 |
Ectoparasitic Insects |
T(263-268) |
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Nov. 2 |
TEST #2 |
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Nov. 4 |
Ectoparasitic Insects; start Protelean Parasites |
T(271-272) |
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Nov. 9 |
Protelean Parasites and Insects as Parasitoids |
T(274-276) |
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Nov. 11 |
Parasitic Mites (incl. Ticks) |
T(242-250) |
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Nov. 16 |
Parasitic Mites; Miscellaneous Parasites |
T(251-257, 299-308) |
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Nov. 18 |
Population Biology and Ecology of Parasites |
T (312-326, 357-359) |
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Nov. 23 |
THANKSGIVING BREAK, NO CLASS Nov 20-28 |
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Nov. 25 |
THANKSGIVING BREAK, NO CLASS |
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Nov. 30 |
Ecology of Parasites |
T(331-348, 363-368) D(9, 14) |
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Dec. 2 |
TEST #3 |
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Dec. 7 |
Ecology of Parasites; Evolutionary Biology of
Parasites |
T(405-416, 459-463,
494-501) |
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Dec. 9 |
Evolutionary Biology of Parasites |
T(397-399, 501-509) |
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FINAL EXAM:
Monday Dec. 13, 2010 1:30 pm ‐ 4 pm |
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Mon. 1:00 -
3:50 pm,
room CNS 212
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Date |
Activity |
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Aug. 25 |
Introduction [first Wed. is on Monday schedule -
also see lecture schedule, above] |
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Aug. 30 |
Parasites on the Internet |
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Sept. 6 |
Labor Day – no class |
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Sept. 13 |
Parasitic Protozoa I: flagellates and amoebae |
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Sept. 20 |
Parasitic Protozoa II: sporozoans and ciliates |
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Oct. 27 |
collection techniques |
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Oct. 4 |
Parasitic Flatworms; INTERNET PROJECT DUE! |
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Oct. 11 |
Tapeworms |
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Oct. 18 |
Spiny-Headed Worms and Parasitic Nematodes |
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Oct. 25 |
LABORATORY TEST I |
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Nov. 1 |
Parasitic Crustacea and Micropredatory Insects; DEADLINE FOR APPROVAL OF PAPER! |
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Nov. 8 |
ORAL PRESENTATIONS |
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Nov. 15 |
Ectoparasitic Insects and Parasitoids |
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Nov. 22 |
THANKSGIVING: NO CLASSES |
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Nov. 29 |
Parasitic Mites (including Ticks) |
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Dec. 6 |
LABORATORY TEST II |