INSTRUCTOR: Dr. Bruce P. Smith
| Center for Natural Sciences Office 166 Lab 171 (607) 274-3971 smithb@ithaca.edu Office Hours: Thursday. 1:00 pm - 3:00 pm, or by
appointment |
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Limnoporus dissortis water
strider
parasitized
by Neolimnochares johnston |
|
Text:
|
|
| Recommended Lab Book: |
Sullivan, J.T. 2006 A
Color Atlas of Parasitology, 7th edition (CD
version 3.0)
(NOTE: only works on PCs, not MACs) |
|
Required reading:
|
Desowitz, R.S. 1987 (paperback edit.). [D] New Guinea Tapeworms and Jewish Grandmothers - Tales of Parasites and People. |
Lecture Schedule |
|
Links |
The field of Parasitology cuts across the widely accepted
classification
of Biology into cellular and molecular, within organism, and among
organisms.
This course covers the general biological principles of
host/parasite
interactions
from the cellular level (e.g. immunology) through to the
ecological
(i.e.
population and community) level. While intended as a general
survey of
parasitism through the animal kingdom, special attention will be
given
to parasites important in human and veterinary medicine. Classical
aspects
of Parasitology will be covered during this course, namely
systematics,
morphology, and life-cycles, but non-traditional topics would
include
coevolution
of hosts and their parasites, the use of parasites and parasitoids
as
biological
control agents of pest species, and the influence of parasites on
hosts
in regards to population biology and community structure.
Goals and Assessment:
The mission statement of our
Department
makes specific reference to providing
fundamental knowledge in biology spanning from molecular
biology to
ecology,
and also, to foster the ability to draw
connections between different areas of
biology and between biology and the liberal arts.
Both this course and the field of
Parasitology cuts across various levels of biological
organization,
promoting integration
and synthesis across various subdisciplines, through
a focus on
a
single biological relationship - the one between hosts and
parasites. Many human
parasites and vectored
diseases
continue as major sources of illness, disfigurement, and death
on a
worldwide level,
but primarily centered in Third World and underdeveloped nations
-
largely
because of economics, politics, and social conditions.
Hence, Parasitology has obvious links
to
the Humanities, including Economics, Politics,
Anthropology, and
Sociology, and requires a global perspective.
Historically, parasitic and vectored diseases regularly
had
profound
effects on the outcome of wars, and various plagues have had
dramatic
impact on
human
societies.
Specific Departmental Goals and
Assessment:
1. Demonstrate
an
understanding of the
fundamental concepts and principles in biology (organismal
biology,
population
and evolutionary biology, ecology). [Assessed
by selected questions on the three term tests and final exam]
6. Effectively
communicate
scientific works in
both oral and written form. [Assessed by
the Internet Project, Oral Presentation]
GRADING
SCHEME
| Undergraduate (Biol-40500) |
Graduate (Biol-50500) |
||
| |
Lecture Test 1 | 13% | 11% |
| Lecture Test 2 | 13% |
11% | |
| Lecture Test 3 |
13% |
11% | |
| Lab Test 1 | 13% | 12% | |
| Lab Test 2 | 8% | 7% | |
| Final Exam | 20% | 20% | |
| Internet
Project |
13% | 12% | |
| Oral Presentation | 7% |
6% | |
| Teaching
Assignment |
n/a | 10 |
Grade
scale:
Letter grades correspond to the
following
percentages:
| A = 93.3 – 100% | A- = 90 – 93.2% | ||
|
|
B+ = 86.6 – 89.5% | B = 83.3 – 86.5% | B- = 80 – 83.2% |
| C+ = 76.6 – 79.5% | C = 73.3 – 76.5% | C- = 70 – 73.2% | |
| D+ = 66.6 – 69.5% | D = 63.3 – 66.5% | D- = 60 – 63.2% | |
| F = below 60% |
LECTURE
Lectures are traditional in
format,
with a strong emphasis on audiovisual presentation.
The main goal is to establish fundamental
knowledge in the field, and to develop the ‘big
picture’, integrating
across subdisciplines of biology and forming connections
with other
fields
within the liberal arts.
Assigned readings from Desowitz (1987) are intended to
help
students
extend their view beyond the science.
Tests and the final exam are in traditional format and
will be
based on
lectures and assigned readings. The
three term tests are not cumulative, while the final exam
includes all
material
in the course. Questions include
short
answer (typically 8 at 3 points each), fill in the blank
(typically 7
at 1
point per blank), and an essay question designed to be answered
in 1-2
pages
(typically 1 essay at 8 points). I
give
a choice of questions on each section of all lecture tests and
the
final exam.
LABORATORY
In the laboratory, the focus
is on developing
diagnostic skills. This
includes
learning
technique (e.g., proper use of stereoscopic
[“dissecting”] and
compound
[bright-field and phase contrast] microscopes, critical
observation
skills
for finding organisms on diagnostic slides and in infected
hosts), as well as fundamental
knowledge in
Parasitology (how to recognize and identify various stages of
parasitic
organisms, important internal and external anatomy of parasitic
organisms). Inherent to these labs
is to
learn basic histology of animal tissues, including both healthy
and
infected
material, and to be able to visualize orientation of structures
and
parasites
in the 3-dimensional host based upon 2-dimensional microscopic
sections. Laboratory tests
are in two parts: 1) a
traditional section testing fundamental
knowledge; 2) a problem-solving
application section, in which students need to find and identify
unknown
parasites and pathologies on slides of biological samples.
I will frequently provide background
information from the host’s case history in questions from the
latter
section,
to assist students in forming a diagnosis. The application
section of
laboratory tests is open book, in which you are allowed to use
the
textbook and
hand-outs from your laboratories. The
Color
Atlas of Parasitology and various image libraries on the
internet
should
be very useful for practicing your diagnostic skills and
preparing for
the
laboratory tests. Any information
presented in the laboratory handouts, or presented in
demonstrations,
will be
testable material.
COMMUNICATION
SKILLS
(Written, Oral, Electronic)
The written
and oral assignments
are
intended
to be independent, self-directed
scientific inquiry. Students must
locate
sources of information, both in the traditional
scientific
literature (journals,
books) as well as electronic media
-
webpages maintained by the World Health
Organization [WHO], Center for Disease Control [CDC], various
organizations
and governmental agencies, academic
institutions, and faculty. Students
evaluate information, interpreting relevance and reliability,
hence practicing
critical thinking skills.
1)
Written
Project
This
project involves writing
skills, as a student must summarize and organize
information into a
cohesive synthesis. The written project will be a status
report on an important
parasite or parasite / micropredator-vectored disease, based
primarily on electronic
media (i.e.,
web-based
resources). Students
can choose their
topic from either human or veterinary medicine.
The project will include an expanded literature cited
section in which
you will reference the websites on which you based your
report, including a
brief description of each website. The
first regular laboratory period is scheduled as an
introduction to the internet
and searching for parasitological information, to get you
started.
DEADLINE FOR HAND-IN: March 4th , 1:00 p.m. - NO EXTENSIONS!
2)
Oral
Presentation
This assignment emphasizes organization and clarity, and practice in oral communication. Each student will summarize a recent primary research article, through preparing and delivering a powerpoint presentation. You can choose a paper that interests you, and I will check whether it is suitable (i.e., not a review article, and neither too simple nor too complex), from current research articles found in relevant scientific journals (e.g., Parasitology, Journal of Parasitology, International Journal for Parasitology, Medical Entomology, or the Parasitology Section of Canadian Journal of Zoology, etc.). The presentation is to be 12-15 min. in length, and will be presented during the April 15th laboratory period. NOTE: DEADLINE FOR APPROVAL OF PAPER: April 8th, 4:00 p.m.
GRADUATE
STUDIES
(MA-Teaching – Biol-50500)
For MAT
students there is an additional assignment, distinguishing it
from the
undergraduate course. MAT students
will
research a topic that we provide, produce and deliver a
powerpoint
presentation, teaching this topic to the class.
This presentation should be approximately 30 min. in
length.
POLICY:
1.
Attendance:
The Undergraduate
Announcements
state the general policy that students are expected to attend
classes
and that
they are responsible for all material even when absent.
Conspicuous unexplained absence (i.e., more
than 10% of the classes) may result in lower
grade,
or dismissal from class.
Acceptable
reasons for absence include 1) student illness, requiring the
student
to be
bed-ridden; 2) death or serious illness in the immediate family;
3)
appearance
in court; 4) religious holidays. Note
that
you MUST have written
documentation for your reason for absence
(e.g., note from doctor, religious leader, etc.)
2.
Readings:
You are expected to read the
assigned readings BEFORE coming
to
class, as a background to that day's
lecture. If you have any questions
regarding material in the reading, please ask during class.
3.
Questions:
Please feel free to ask
questions
in
class. Chances are that if there is
something that you don't understand, then others in the class
are also
confused
- don’t hesitate to ask your question.
4. Accommodation for Students with Disabilities:
5. Students with Apparent Psychological / Emotional Problems:
6.
Personal Conduct:
Tues./Thurs.
10:50 am - 12:05 pm, CNS 1AB
|
Date |
Topic |
|
|
Jan. 22 |
Introduction |
T(1-9) |
|
Jan. 24 |
The Parasite's Environment; start
Physiol. & Biochem. |
D(1, 2) |
|
Jan. 28 |
Physiol. and Biochem.; start
Immunology [during
Lab 1] |
T(27-35) |
|
Jan. 29 |
Immunology; start Parasitic Protozoa |
T(13-27, 42-49) D(10) |
|
Jan. 31 |
Parasitic Protozoa: flagellates |
T(49-58) |
|
Feb. 5 |
Parasitic Protozoa: amoebae,
apicomplexans |
T(58-69), D(6, 13) |
|
Feb. 7 |
Parasitic Protozoa: apicomplexans,
ciliates, myxozoans |
T(69-100, 288-292), D(4, 5) |
|
Feb. 12 |
Parasitic Flatworms: turbellarians,
monogeneans, aspidobothrians |
T(103-105,
128-134) D(11) |
|
Feb. 14 |
Parasitic Flatworms: digeneans |
T(105-117)
|
|
Feb. 19 |
Parasitic Flatworms: digeneans; start
Tapeworms |
T(117-128,
134-139) |
|
Feb. 21 |
TEST #1 |
|
|
Feb. 26 |
Tapeworms |
T (139-153), D(8) |
|
Feb. 28 |
Parasitic
Nematodes |
T(160-173) |
|
March 5 |
Parasitic Nematodes |
T(173-184), D(3) |
|
March 7 |
Parasitic Nematodes |
T(184-192), D(12) |
|
March 12 |
SPRING
BREAK – NO CLASS! |
|
|
March 14 |
SPRING
BREAK – NO CLASS! |
|
|
March 19 |
Nematomorpha,
Spiny-Headed Worms, Tongueworms |
T(197-223,
296-298) |
|
March 21 |
Parasitic Crustacea; Micropredators and
Vectors |
T(225-242, 257-263), D(7) |
|
March 26 |
Micropredators and Vectors |
T(268-270) |
|
March 28 |
TEST #2 |
|
|
April 2 |
Ectoparasitic Insects |
T(263-268) |
|
April 4 |
Ectoparasitic Insects; start
Protelean Parasites |
T(271-272) |
|
April 9 |
Protelean Parasites and Insects as
Parasitoids |
T(274-276) |
|
April 11 |
Parasitic Mites (incl. Ticks) |
T(242-250) |
|
April 16 |
Parasitic Mites; Miscellaneous Parasites |
T(251-257,
299-308) |
|
April 18 |
Population Biology and
Ecology of Parasites |
T
(312-326, 357-359) |
|
Date |
Topic
(continued) |
|
|
April 23 |
Ecology
of Parasites |
T(331-348, 363-368) D(9, 14) |
|
April 25 |
TEST #3 |
|
|
April 30 |
Ecology of Parasites; Evolutionary
Biology of Parasites |
T(405-416, 459-463,
494-501) |
|
May 2 |
Evolutionary Biology of Parasites |
T(397-399,
501-509) |
|
|
FINAL
EXAM: Monday MAY 13,
2013 1:30
pm ‐ 4 pm* |
|
Mon. 1:00 - 3:50
pm, room CNS 212
|
Date |
Activity |
|
Jan. 28 |
Lecture: Physiol. and Biochem.; start
Immunology [also see lecture schedule, above] |
|
Feb. 4 |
Parasites
on the Internet |
|
Feb. 11 |
Parasitic
Protozoa I: flagellates and amoebae |
|
Feb. 18 |
Parasitic
Protozoa II: sporozoans and ciliates |
|
Feb. 25 |
Parasitic
Flatworms |
|
March 4 |
Tapeworms; INTERNET
PROJECT DUE! |
|
March 11 |
SPRING
BREAK – NO CLASS |
|
March 18 |
Spiny-Headed
Worms and Parasitic Nematodes |
|
March 25 |
LABORATORY
TEST I |
|
April 1 |
collection
techniques |
|
April 8 |
Parasitic
Crustacea and Micropredatory Insects; DEADLINE
FOR APPROVAL OF PAPER! |
|
April 15 |
ORAL
PRESENTATIONS |
|
April 22 |
Ectoparasitic
Insects and Parasitoids |
|
April 29 |
Parasitic
Mites (including Ticks) |
|
May 6 |
LABORATORY
TEST II |